FUNCTIONAL & INTEGRATIVE GENOMICS

Salinity-associated microRNAs and their potential roles in mediating salt tolerance in rice colonized by the endophytic root fungus Piriformospora indica

Transcriptome analysis reveals molecular mechanisms of sclerotial development in the rice sheath blight pathogen Rhizoctonia solani AG1-IA

Regulatory network reconstruction of five essential microRNAs for survival analysis in breast cancer by integrating miRNA and mRNA expression datasets

The RNA-binding protein FXR1 modulates prostate cancer progression by regulating FBXO4

Global transcriptome analysis uncovers the gene co-expression regulation network and key genes involved in grain development of wheat (Triticum aestivum L.)

Transcriptome sequencing profiles of cervical cancer tissues and SiHa cells

Decoding microbial community intelligence through metagenomics for efficient wastewater treatment

Genome-wide identification and expression analysis of Hsp70, Hsp90, and Hsp100 heat shock protein genes in barley under stress conditions and reproductive development

Evaluation of circulating leukocyte transcriptome and its relationship with immune function and blood markers in dairy cows during the transition period

Functional characterization of HSFs from wheat in response to heat and other abiotic stress conditions

Comparative transcriptome profiling of the response to Pyrenochaeta lycopersici in resistant tomato cultivar Mogeor and its background genotype—susceptible Moneymaker

Inefficient ATP synthesis by inhibiting mitochondrial respiration causes lipids to decrease in MSTN-lacking muscles of loach Misgurnus anguillicaudatus

Cryptochrome deletion in p53 mutant mice enhances apoptotic and anti-tumorigenic responses to UV damage at the transcriptome level

Flax tubulin and CesA superfamilies represent attractive and challenging targets for a variety of genome- and base-editing applications

Implication of salt stress induces changes in pigment production, antioxidant enzyme activity, and qRT-PCR expression of genes involved in the biosynthetic pathway of Bixa orellana L.

Computational detection and experimental validation of segmental duplications and associated copy number variations in water buffalo (Bubalus bubalis)

Genome analysis provides insight about pathogenesis of Indian strains of Rhizoctonia solani in rice

QTLian breeding for climate resilience in cereals: progress and prospects

Transcriptomic analysis to affirm the regulatory role of long non-coding RNA in horn cancer of Indian zebu cattle breed Kankrej (Bos indicus)

Proteomic and transcriptomic analysis to unravel the influence of high temperature on banana fruit during postharvest storage

Single-cell transcriptome provides novel insights into antler stem cells, a cell type capable of mammalian organ regeneration

Transcriptome-wide identification and characterization of microRNAs responsive to phosphate starvation in Populus tomentosa

RNA-Seq revealed that infection with white tip nematodes could downregulate rice photosynthetic genes

Buffalo liver transcriptome analysis suggests immune tolerance as its key adaptive mechanism during early postpartum negative energy balance

Membrane proteomic analysis reveals the intestinal development is deteriorated by intrauterine growth restriction in piglets

Integrated analysis of RNA-seq and microRNA-seq depicts miRNA–mRNA networks involved in stripe patterns of Botia superciliaris skin

Targeted expression of a cysteine protease (AdCP) in tapetum induces male sterility in Indian mustard, Brassica juncea

Insights into transcriptional characteristics and homoeolog expression bias of embryo and de-embryonated kernels in developing grain through RNA-Seq and Iso-Seq

An RNAi suppressor activates in planta virus–mediated gene editing

Hippocampus-specific regulation of long non-coding RNA and mRNA expression in germ-free mice

High-throughput sequencing and differential expression analysis of miRNAs in response to Brassinosteroid treatment in Arabidopsis thaliana

Plasma protein(s)–based conceptual diagnostic tool for assessing high-altitude acclimation in humans

Identification of microRNA-target modules from rice variety Pusa Basmati-1 under high temperature and salt stress

Pod-shattering characteristics differences between two groups of soybeans are associated with specific changes in gene expression

Whole genome sequencing and identification of host-interactive genes in the rice endophytic Leifsonia sp. ku-ls

Identification of Fusarium graminearum-responsive miRNAs and their targets in wheat by sRNA sequencing and degradome analysis

Genome-wide identification and characterization of long non-coding RNAs during differentiation of visceral preadipocytes in rabbit

Dynamic gene expression changes in response to micronutrient, macronutrient, and multiple stress exposures in soybean

Comparative analysis of integument transcriptomes identifies genes that participate in marking pattern formation in three allelic mutants of silkworm, Bombyx mori

Genome-wide cis-regulatory signatures for modulation of agronomic traits as exemplified by drought yield index (DYI) in chickpea

Blocked synthesis of sporopollenin and jasmonic acid leads to pollen wall defects and anther indehiscence in genic male sterile wheat line 4110S at high temperatures

Correction to: Analysis of the quinoa genome reveals conservation and divergence of the flowering pathways

Gene expression profiles between cystic and solid vestibular schwannoma indicate susceptible molecules and pathways in the cystic formation of vestibular schwannoma

A transcriptomic study of selenium against liver injury induced by beta-cypermethrin in mice by RNA-seq

Pan-genome analysis of Riemerella anatipestifer reveals its genomic diversity and acquired antibiotic resistance associated with genomic islands

Endoplasmic reticulum retention signaling and transmembrane channel proteins predicted for oilseed ω3 fatty acid desaturase 3 (FAD3) genes

Dynamic response of RNA editing to temperature in grape by RNA deep sequencing