iOmicsPASS: network-based integration of multiomics data for predictive subnetwork discovery.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0099-y
Synergy from gene expression and network mining (SynGeNet) method predicts synergistic drug combinations for diverse melanoma genomic subtypes
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0085-4
Differential metabolic activity and discovery of therapeutic targets using summarized metabolic pathway models
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0087-2
Flux sampling is a powerful tool to study metabolism under changing environmental conditions.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0109-0
Parsimonious Gene Correlation Network Analysis (PGCNA): a tool to define modular gene co-expression for refined molecular stratification in cancer
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0090-7
Novel insights into gene expression regulation during meiosis revealed by translation elongation dynamics
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0089-0
The multiplex network of human diseases.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0092-5
From expression footprints to causal pathways: contextualizing large signaling networks with CARNIVAL.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0118-z
Defining subpopulations of differential drug response to reveal novel target populations.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0113-4
Simulation of heterosis in a genome-scale metabolic network provides mechanistic explanations for increased biomass production rates in hybrid plants
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0101-8
A yield-cost tradeoff governs Escherichia coli’s decision between fermentation and respiration in carbon-limited growth
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0093-4
Identification of hyper-rewired genomic stress non-oncogene addiction genes across 15 cancer types
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0104-5
Defining rules for cancer cell proliferation in TRAIL stimulation
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0084-5
Genetic signature related to heme-hemoglobin metabolism pathway in sepsis secondary to pneumonia.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0105-4
ModelBricks-modules for reproducible modeling improving model annotation and provenance.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0114-3
Mechanistically detailed systems biology modeling of the HGF/Met pathway in hepatocellular carcinoma
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0107-2
A data driven approach reveals disease similarity on a molecular level.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0117-0
A network-based approach to uncover microRNA-mediated disease comorbidities and potential pathobiological implications
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0115-2
Identification of an early cell fate regulator by detecting dynamics in transcriptional heterogeneity and co-regulation during astrocyte differentiation
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0095-2
Publisher Correction: ComPath: an ecosystem for exploring, analyzing, and curating mappings across pathway databases
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0082-7
Utilizing genome-scale models to optimize nutrient supply for sustained algal growth and lipid productivity.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0110-7
Mapping connections in signaling networks with ambiguous modularity
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0096-1
Combinatorial perturbation analysis reveals divergent regulations of mesenchymal genes during epithelial-to-mesenchymal transition
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0097-0
Multi-dimensional computational pipeline for large-scale deep screening of compound effect assessment: an in silico case study on ageing-related compounds
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0119-y
Publisher Correction: Multi-experiment nonlinear mixed effect modeling of single-cell translation kinetics after transfection
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0083-6
Publisher Correction: Mathematical model of hemodynamic mechanisms and consequences of glomerular hypertension in diabetic mice
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0081-8
An in-silico approach for discovery of microRNA-TF regulation of DISC1 interactome mediating neuronal migration
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0094-3
Genetic interaction networks mediate individual statin drug response in Saccharomyces cerevisiae
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0112-5
Hierarchical graphical model reveals HFR1 bridging circadian rhythm and flower development in Arabidopsis thaliana
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0106-3
Logical design of oral glucose ingestion pattern minimizing blood glucose in humans.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0108-1
Signal integration and information transfer in an allosterically regulated network
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0100-9
An unconventional uptake rate objective function approach enhances applicability of genome-scale models for mammalian cells
来源期刊:NPJ Systems Biology and ApplicationsDOI:10.1038/s41540-019-0103-6
An omnidirectional visualization model of personalized gene regulatory networks.
来源期刊:NPJ systems biology and applicationsDOI:10.1038/s41540-019-0116-1